Project image

Gannet

Last updated date

6:04pm

Gannet is a free, open-source MATLAB-based software toolkit for analyzing edited single-voxel 1H magnetic resonance spectroscopy (MRS) data. Its largely automated functions cover all the essential steps of modern MRS analysis:

  • Loading raw data
  • Substantial preprocessing
  • Signal modeling
  • Voxel co-registration with structural MR images
  • Concentration estimation based on tissue composition

Several existing software packages for MRS data analysis require substantial user input or offer a wide selection of processing options. In contrast, the philosophy behind Gannet is to provide users with a complete automated pipeline without the need for significant user input.

Additionally, as open-source software, advanced users have the ability to modify the underlying routines for ad hoc purposes.

Further details can found on the Gannet documentation website.

Weill Cornell Medicine Mikkelsen Lab 407 E 61st St., RR-109 New York, NY 10065 Phone: (646) 962-6218